Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835620.1_cds_XP_016506000.1_19274
CDS Infomation

[gene=LOC107823804] [db_xref=GeneID:107823804] [protein=uncharacterized protein LOC107823804] [protein_id=XP_016506000.1] [location=join(242511..242930,244207..245155,245238..245334,245413..245533,245624..245722,245811..246113,246191..246298,247317..247388,247495..247581,247849..247920,248018..248107,248392..248499,248585..248653,249517..249591)] [gbkey=CDS]
Sequence

ATGAACAACCTTACCTTTGACAAAACCTTAATGCCCAACCCCTTCTTGTCAGTTTCATCT
TTACACAATTCAAGAATCTCAAAATCCCTTTTTATTCCCAGAAAATCCAATAAAGTTACT
GTTTCTCCTTTTAAACATGATAATTCAAGCTCCCTAACAAATGGGTTCTTATCAAGAACT
CATTTTTTACCCAAAAAATCCAAGAAAGTTACTACTTTTGCTGATAAATATGATAATTGC
AGCTCAATAACAAGTGGGGTTTTGTCAAGAACTGATTTTTATGGCAGAAAGAGCAAGAAA
GTTGTTGTTTTTGCTGCTTCTAAAGATGATAGGAGTAATAATAAGCTTGACCAGTGGGAC
CAAATGGAGCTCAAGTTTGGTAGATTGATTGGTGAAGACCCAAAATTGACCATAGCTAAG
ATAATAAGTAGGAAGACAAACCCAGATGCATCTTATCTTGAAATTGAAGAGTCATTTGGA
AAGAAGAAGGGTAAAACATCTGGTGAAATTGTGGAGGTTCCATTTGACGCGTCCCAGGAA
AAGAATTCTCTCAATTCATCAAATGGATTAAATTTGGTTCGTCCTGTGCCGAAGAAGGGA
GTTAAGTTCGAGGTTGATGATAAACCGCCAAAGACTGAAGGTGATAAACAAAGCCAACCG
ATTTCAAGGCCTGCTGTAAGTAGGAGAAGTAGTGTTCCGAATGTTATGTTGCGGAAACCG
CTAGAGACTGAGGGTGATAATAAACAAAGCCAACCAATTTCAGTACCTGCAGTAAGTAGG
AAAAGTAGTGTTCCAAATGTTATATTGCGGAAACCATCTTTGTATTCTGAGGAGGATGAA
TCATCAAATTTCAAAATTAGGCCAAACTTGACACTGAAAATGGGCAAAGAACGGAAACCT
GAGAAGTTTAGTGATGTTACATTGCTGAAGAAGCCGGAGCCAATGAGGATCAACTCTGAC
AGCAGTGAAAACAATGGACAATCAAGTGATAAGTTTAGTGATGCTACATTGTTGAAGAAG
CCGGAGCCGATGAGTATCAACTCTGACAATAGTGAAGATAATGGACAATCAAGCGATATT
TTACCTGTAGCTAGCAACGACACTGCAGATTCTAGTCTGAAGGTTTATGCATCAACTAAT
GAATCCAAAAACAGCTTGCTTCTGAATAAGCCAGAGGTGAGTAATTTGAATCTGAAGATA
GATCAAAATCAAGGATCTTCCGAGGATCAGCGTACAGGTGTTTTGGATGAAAATACGTTG
AATGCTGCTAACGTTTCTTCTGAGCATACAAGTGTGGCAGAGAATAAACTTGACCAACCG
TTACAAAGTAGCATAAGCAAACCTCTTGACGAGCAAGGCTCTGAGACAGGATCCCAGCAG
ACTGATACATGGCCTGCCGAGAGAAGTTCCGACTCCAACAAACCCATGGAATCTTTGGAT
GCTGCACTTCTTGGAAAACCCAAAAGATTAGACCAACCTAAAAAGGCAACATCAAGCGTT
AGTCAAGACACCATGCGTCCTGTCAAATCTGAGGGCTATGGAAATGCTTCAGAGATTGAC
AACTTCCTGACGAAATCACCCATTAAGGAACACGAGGATAATGACTGGGTAAGAGCTGAA
GAGCTTGTTAAGAGTGGAGGAAGAGAGGAAGTGGAACTAGTTAGTTGTAGCACCAGAGGC
TTTGTTGTATCTTTTGGTTCCTTGATAGGATTTTTGCCATACCGCAATCTAGCAGCCAGG
TGGAAATTCTTAGCTTTTGAATCTTGGTTAAGGCAAAAAGGCGTAAATCCATCCCTGTAC
AAGCAAGGTCTGGGGATCATTGGAGGCTATGATGGTTTTGGTAAGGCAGCTTCTCCTGAG
GCCGGAGTAGATTCACAAATTGCTCAAAATGTCGAAGAAGAGGAGATCTCGTCAGACATG
AAACTGGAAGATCTTCTCAGGATTTACGATCAAGAGAAACTCAAGTTCTTATCATCATTT
GTTGGCCAGAGAGTCAGAGTAAGTGTGGTGTTGGCTGACAGAAATTCGAGAAGGCTAATA
TTCTCGATAAAGGCGAAAGAAAAGGAGGAATTGGTCGAGAAGAAGAGGAGCCTTATGGCT
AAACTTCAAGTCGGGGACGTGGTAAAATGTTGCATACAAAAAATTACCTACTTCGGAATA
TTTGTTGAGGTTGAAGGAGTACCTGCTCTAATTCACCAGACAGAAGTTTCATGGGACGCC
ACTTTAGACCCTGCGTCGTACTTTAAAATTGGTCAGATTGTGGAGGCAAAAGTTCACCAG
TTAGACTTTTCACTTGAGCGCATCTTTTTATCGTTGAAGGAAATAACGCCAGATCCGATG
ATGGAGGCATTAGAGGCTGTAGTTGGTGATCATGATAATTTGAATGGAAAACTCCAAGCA
GCAGAGCAAGATACCGAGTGGCCGGACGTGGAATCACTTATCAAAGAATTACAGCAGTTT
GAGGGTATTTCCTCTGTGTCAAAAGGACGGTACTTCTTGAGCCCTGGTTTGGCTCCAACA
TTTCAGGTATATATGGCATCCATGTTTGAAAATCAATACAAGTTACTTGCTCGGTCGGGA
AATAGGGTACAAGAGGTGATAGTAGAAACACTATTGGGTAAAGAGGAAATGAAATCTGCA
ATTCAATCTTGTACAAACAAAGTTGAATAA

Peptide Sequence

PEP ID

XP_016506000.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107823804 [Nicotiana tabacum]
Sequence

MNNLTFDKTLMPNPFLSVSSLHNSRISKSLFIPRKSNKVTVSPFKHDNSSSLTNGFLSRT
HFLPKKSKKVTTFADKYDNCSSITSGVLSRTDFYGRKSKKVVVFAASKDDRSNNKLDQWD
QMELKFGRLIGEDPKLTIAKIISRKTNPDASYLEIEESFGKKKGKTSGEIVEVPFDASQE
KNSLNSSNGLNLVRPVPKKGVKFEVDDKPPKTEGDKQSQPISRPAVSRRSSVPNVMLRKP
LETEGDNKQSQPISVPAVSRKSSVPNVILRKPSLYSEEDESSNFKIRPNLTLKMGKERKP
EKFSDVTLLKKPEPMRINSDSSENNGQSSDKFSDATLLKKPEPMSINSDNSEDNGQSSDI
LPVASNDTADSSLKVYASTNESKNSLLLNKPEVSNLNLKIDQNQGSSEDQRTGVLDENTL
NAANVSSEHTSVAENKLDQPLQSSISKPLDEQGSETGSQQTDTWPAERSSDSNKPMESLD
AALLGKPKRLDQPKKATSSVSQDTMRPVKSEGYGNASEIDNFLTKSPIKEHEDNDWVRAE
ELVKSGGREEVELVSCSTRGFVVSFGSLIGFLPYRNLAARWKFLAFESWLRQKGVNPSLY
KQGLGIIGGYDGFGKAASPEAGVDSQIAQNVEEEEISSDMKLEDLLRIYDQEKLKFLSSF
VGQRVRVSVVLADRNSRRLIFSIKAKEKEELVEKKRSLMAKLQVGDVVKCCIQKITYFGI
FVEVEGVPALIHQTEVSWDATLDPASYFKIGQIVEAKVHQLDFSLERIFLSLKEITPDPM
MEALEAVVGDHDNLNGKLQAAEQDTEWPDVESLIKELQQFEGISSVSKGRYFLSPGLAPT
FQVYMASMFENQYKLLARSGNRVQEVIVETLLGKEEMKSAIQSCTNKVE

Transcript Sequence

Gene sequence data has not been registered.